WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Gene expression quantification and differential expression was analyzed using cufflinks v2.2.1. Enriched contains only genes significantly enriched (differentially expressed >= 2.4 fold in total RNA or >= 3.2 fold in DSN treated total RNA) in the NSM neurons versus the reference. Description  Genes significantly enriched in NSM neurons (isolated by FACS) versus the reference, according to RNAseq analysis towards DSN treated(Duplex-Specific Nuclease method to deplete rRNA sequences) total RNA.
Primary Identifier  WBPaper00045974:NSM_enriched_DSN-treated_RNAseq

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two pharyngeal neurosecretory-motor neurons. NSM neurosecretory-motor neuron WBbt:0003666

462 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000079 adr-1 H15N14.1 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000161 apa-2 T20B5.1 Caenorhabditis elegans
WBGene00000173 aqp-5 C35A5.1 Caenorhabditis elegans
WBGene00000203 arx-5 Y37D8A.1 Caenorhabditis elegans
WBGene00000369 ccf-1 Y56A3A.20 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000540 cln-3.2 C01G8.2 Caenorhabditis elegans
WBGene00000549 cls-2 R107.6 Caenorhabditis elegans
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000793 crh-1 Y41C4A.4 Caenorhabditis elegans
WBGene00000818 csn-6 Y67H2A.6 Caenorhabditis elegans
WBGene00000832 ctn-1 Y23H5A.5 Caenorhabditis elegans
WBGene00000837 cul-2 ZK520.4 Caenorhabditis elegans
WBGene00000877 cyn-1 Y49A3A.5 Caenorhabditis elegans
WBGene00000882 cyn-6 F42G9.2 Caenorhabditis elegans
WBGene00000901 daf-5 W01G7.1 Caenorhabditis elegans
WBGene00000958 dgk-1 C09E10.2 Caenorhabditis elegans
WBGene00000959 dgk-2 F46H6.2 Caenorhabditis elegans
WBGene00000973 dhs-9 Y32H12A.3 Caenorhabditis elegans
WBGene00000995 die-1 C18D1.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

0 Regulated By Gene

0 Regulated By Molecule