WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Results are presented as the relative up- or downregulation for genes with a difference of 2 fold or more after analyzing expression and using confidence limits with multiple testing corrections (Benjamini-Hochberg FDR). Description  Genes that significantly decreased expression 1 our after biofilm was formed by Y. pseudotuberculosis YP III comparing to worms infected by Y. pseudotuberculosis del-ypsI/ytbI mutant (that do not form biofilm)
Primary Identifier  WBPaper00045865:biofilm_downregulated_B Regulated By Treatment  Bacteria infection: Yersinia pseudotuberculosis YP III

0 Anatomy Terms

147 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00000287 cal-3 M02B7.6 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000593 col-2 W01B6.7 Caenorhabditis elegans
WBGene00000612 col-35 C15A11.1 Caenorhabditis elegans
WBGene00000614 col-37 ZK863.2 Caenorhabditis elegans
WBGene00000622 col-45 F53G12.7 Caenorhabditis elegans
WBGene00000701 col-127 F54D1.3 Caenorhabditis elegans
WBGene00000731 col-158 D2023.7 Caenorhabditis elegans
WBGene00000737 col-164 T21D9.1 Caenorhabditis elegans
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
WBGene00001167 eef-2 F25H5.4 Caenorhabditis elegans
WBGene00001169 eef-1A.2 R03G5.1 Caenorhabditis elegans
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans
WBGene00001242 elo-4 C40H1.4 Caenorhabditis elegans
WBGene00001251 elt-3 K02B9.4 Caenorhabditis elegans
WBGene00001444 flp-1 F23B2.5 Caenorhabditis elegans
WBGene00001451 flp-8 F31F6.4 Caenorhabditis elegans
WBGene00001455 flp-12 C05E11.8 Caenorhabditis elegans
WBGene00001464 flp-21 C26F1.10 Caenorhabditis elegans
WBGene00001732 grl-23 E02A10.2 Caenorhabditis elegans
WBGene00001734 grl-25 ZK643.8 Caenorhabditis elegans
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
WBGene00002118 ins-35 K02E2.4 Caenorhabditis elegans
WBGene00002178 jnk-1 B0478.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule