WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Pair-wise significance testing (mutant vs. wild-type) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Criteria for differential expression was set by employing log2(ratio) >= 0.848 and p-value < 0.001. Description  Differentially expressed genes in nhr-66(ok940) compared to wild-type animals using microarray analysis.
Primary Identifier  WBPaper00040998:nhr-66_regulated

0 Anatomy Terms

65 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000028 abu-5 Y105C5A.4 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00003094 lys-5 F58B3.2 Caenorhabditis elegans
WBGene00003663 nhr-73 C27C7.4 Caenorhabditis elegans
WBGene00003664 nhr-74 C27C7.3 Caenorhabditis elegans
WBGene00004003 pgp-9 C47A10.1 Caenorhabditis elegans
WBGene00004995 spp-10 C28C12.7 Caenorhabditis elegans
WBGene00006418 spl-2 B0222.4 Caenorhabditis elegans
WBGene00006950 wrt-4 ZK678.5 Caenorhabditis elegans
WBGene00007770 nhr-259 C27C7.8 Caenorhabditis elegans
WBGene00008634 F10A3.4 F10A3.4 Caenorhabditis elegans
WBGene00008655 lips-3 F10F2.3 Caenorhabditis elegans
WBGene00008673 F11A5.5 F11A5.5 Caenorhabditis elegans
WBGene00009192 asah-2 F27E5.1 Caenorhabditis elegans
WBGene00009355 F33A8.7 F33A8.7 Caenorhabditis elegans
WBGene00009397 clec-66 F35C5.9 Caenorhabditis elegans
WBGene00009432 cld-9 F35E12.8 Caenorhabditis elegans
WBGene00009616 F41D3.11 F41D3.11 Caenorhabditis elegans
WBGene00009806 F47B8.5 F47B8.5 Caenorhabditis elegans
WBGene00009877 F49C12.7 F49C12.7 Caenorhabditis elegans
WBGene00010034 F54B11.11 F54B11.11 Caenorhabditis elegans
WBGene00010166 gmd-2 F56H6.5 Caenorhabditis elegans
WBGene00012201 W02B12.1 W02B12.1 Caenorhabditis elegans
WBGene00012346 W08G11.1 W08G11.1 Caenorhabditis elegans
WBGene00013450 oac-56 Y67A10A.1 Caenorhabditis elegans
WBGene00013587 hrg-10 Y80D3A.9 Caenorhabditis elegans
WBGene00014009 lips-6 ZK617.2 Caenorhabditis elegans
WBGene00014183 ZK1025.3 ZK1025.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003656 nhr-66 T09A12.4 Caenorhabditis elegans

0 Regulated By Molecule