WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2v 1.18.1, fold change > 1.5, adjusted p-value < 0.01. Description  Transcripts that showed significantly increased expression in rrf-3(pk1426) comparing to in N2 at L2 larva stage.
Primary Identifier  WBPaper00056169:rrf-3(pk1426)_upregulated_L2
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0 Anatomy Terms

510 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000624 col-47 Y18H1A.12 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000633 col-56 T08B2.2 Caenorhabditis elegans
WBGene00000641 col-65 K08C9.4 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000651 col-75 K03H9.2 Caenorhabditis elegans
WBGene00000655 col-79 C09G5.3 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000679 col-105 F58F6.2 Caenorhabditis elegans
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
WBGene00000684 col-110 F19C7.7 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000687 col-113 C34D4.15 Caenorhabditis elegans
WBGene00000705 col-131 C39E9.3 Caenorhabditis elegans
WBGene00000726 col-153 F17C11.3 Caenorhabditis elegans
WBGene00000745 col-172 F38B6.5 Caenorhabditis elegans
WBGene00000759 col-186 E03G2.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004510 rrf-3 F10B5.7 Caenorhabditis elegans

0 Regulated By Molecule