WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in hyp4, hyp5, hyp6 according to single cell RNAseq.
Primary Identifier  WBPaper00061340:hyp4_hyp5_hyp6
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Cylindrical hypodermal syncytium in head hyp5 lineage name: ABarpappap WBbt:0004685
Cylindrical hypodermal syncytium in head hyp4 lineage name: ABarpapapa WBbt:0004687
Cylindrical hypodermal syncytium in head hyp6 lineage name: ABarpaapaa WBbt:0004679

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000116 alh-10 C54D1.4 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000652 col-76 M110.1 Caenorhabditis elegans
WBGene00000695 col-121 F56D5.1 Caenorhabditis elegans
WBGene00000831 ctl-2 Y54G11A.5 Caenorhabditis elegans
WBGene00000929 dao-3 K07E3.3 Caenorhabditis elegans
WBGene00000968 dhs-4 T05F1.10 Caenorhabditis elegans
WBGene00000972 dhs-8 K10H10.3 Caenorhabditis elegans
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00000991 dhs-28 M03A8.1 Caenorhabditis elegans
WBGene00000996 dif-1 F49E8.5 Caenorhabditis elegans
WBGene00001006 dlg-1 C25F6.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001073 dpy-11 F46E10.9 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001105 dsl-3 Y41D4B.10 Caenorhabditis elegans
WBGene00001108 dsl-6 H02I12.4 Caenorhabditis elegans
WBGene00001159 eff-1 C26D10.5 Caenorhabditis elegans
WBGene00001251 elt-3 K02B9.4 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001428 fkb-3 C05C8.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule