WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  limma-voom in which undetected and lowly expressed genes (CPM of less than one) were filtered out. FDR < 0.05 and fold change > 2. Description  Transcripts that showed significantly increased expression in pnp-1(jy121) comparing to in N2 animals.
Primary Identifier  WBPaper00061319:pnp-1(jy121)_upregulated
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0 Anatomy Terms

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00002055 ifc-1 F37B4.2 Caenorhabditis elegans
WBGene00002188 kgb-2 ZC416.4 Caenorhabditis elegans
WBGene00004149 trpl-5 T16A1.7 Caenorhabditis elegans
WBGene00004809 skr-3 F44G3.6 Caenorhabditis elegans
WBGene00004810 skr-4 Y60A3A.18 Caenorhabditis elegans
WBGene00006718 ubc-23 C28G1.1 Caenorhabditis elegans
WBGene00006986 zip-1 Y75B8A.35 Caenorhabditis elegans
WBGene00007133 B0284.3 B0284.3 Caenorhabditis elegans
WBGene00007153 clec-41 B0365.6 Caenorhabditis elegans
WBGene00007297 vsra-1 C04F12.1 Caenorhabditis elegans
WBGene00007659 pals-5 C17H1.6 Caenorhabditis elegans
WBGene00007867 C32H11.4 C32H11.4 Caenorhabditis elegans
WBGene00007875 dod-24 C32H11.12 Caenorhabditis elegans
WBGene00008068 sdz-6 C43D7.5 Caenorhabditis elegans
WBGene00008267 C53A5.9 C53A5.9 Caenorhabditis elegans
WBGene00008269 C53A5.11 C53A5.11 Caenorhabditis elegans
WBGene00008584 irg-4 F08G5.6 Caenorhabditis elegans
WBGene00009166 F26F2.1 F26F2.1 Caenorhabditis elegans
WBGene00009168 F26F2.3 F26F2.3 Caenorhabditis elegans
WBGene00009393 clec-62 F35C5.5 Caenorhabditis elegans
WBGene00009429 irg-5 F35E12.5 Caenorhabditis elegans
WBGene00009430 F35E12.6 F35E12.6 Caenorhabditis elegans
WBGene00009431 dct-17 F35E12.7 Caenorhabditis elegans
WBGene00009595 cbp-3 F40F12.7 Caenorhabditis elegans
WBGene00009908 F49H6.5 F49H6.5 Caenorhabditis elegans
WBGene00010123 F55G11.2 F55G11.2 Caenorhabditis elegans
WBGene00010124 F55G11.4 F55G11.4 Caenorhabditis elegans
WBGene00010125 dod-22 F55G11.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019298 pnp-1 K02D7.1 Caenorhabditis elegans

0 Regulated By Molecule