WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. Description  Transcripts enriched in ADF according to single cell RNAseq.
Primary Identifier  WBPaper00061651:ADF_enriched

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two neurons that have dual ciliated endings in the amphid sensillum. The endings are in the amphid channel, which is open to the outside. Processes from lateral cell bodies enter the ventral cord via the amphidial commissures and turn anteriorly to enter the nerve ring. The processes of ADF run near the outside surface and posterior face of the ring, in close association with those of AIZ. They meet at the dorsal mid-line and terminate; there is a gap junction at the point or contact. The main synaptic output is to RIA and AIZ; there are also synapses to SMB, AUA and RIR, usually in dyadic combinations with RIA or AIZ. AWB synapses onto ADF in several places, and there are gap junctions to RIH, ADA and AIA. ADF   WBbt:0005660

167 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000209 asg-1 K07A12.3 Caenorhabditis elegans
WBGene00000244 bbs-8 T25F10.5 Caenorhabditis elegans
WBGene00000282 cah-4 R01E6.3 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000492 che-13 F59C6.7 Caenorhabditis elegans
WBGene00000920 daf-28 Y116F11B.1 Caenorhabditis elegans
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00001129 dyf-13 C27H5.7 Caenorhabditis elegans
WBGene00001237 elc-2 W03H1.2 Caenorhabditis elegans
WBGene00001464 flp-21 C26F1.10 Caenorhabditis elegans
WBGene00001480 fmo-5 H24K24.5 Caenorhabditis elegans
WBGene00002086 ins-3 ZK75.3 Caenorhabditis elegans
WBGene00002101 ins-18 T28B8.2 Caenorhabditis elegans
WBGene00002107 ins-24 ZC334.3 Caenorhabditis elegans
WBGene00002245 lag-1 K08B4.1 Caenorhabditis elegans
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans
WBGene00003163 mdl-1 R03E9.1 Caenorhabditis elegans
WBGene00003403 mps-1 C29F5.4 Caenorhabditis elegans
WBGene00003634 nhr-44 T19A5.4 Caenorhabditis elegans
WBGene00003690 nhr-100 C28D4.1 Caenorhabditis elegans
WBGene00003695 nhr-105 C06G3.1 Caenorhabditis elegans
WBGene00003728 nhr-138 C28D4.9 Caenorhabditis elegans
WBGene00003741 nlp-3 F48C11.3 Caenorhabditis elegans
WBGene00003851 odr-4 Y102E9.1 Caenorhabditis elegans
WBGene00003885 osm-5 Y41G9A.1 Caenorhabditis elegans
WBGene00003886 osm-6 R31.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule