WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Percolator (semi-supervised learning machine) was used at constant 0.01% FDR. Percolator assigns a q-value to each spectrum, which is defined as the minimal FDR at which the identification is deemed correct. These q values are estimated using the distribution of scores from decoy database search, and the q-value threshold was set to <0.01 to validate any peptide. Description  Proteins contained in RSR-2 complex, according to immunoprecipitation using anti-RSR-2, and MudPIT, liquid chromatography and mass spectrometry.
Primary Identifier  WBPaper00042477:RSR-2_complex

0 Anatomy Terms

18 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001423 fib-1 T01C3.7 Caenorhabditis elegans
WBGene00001877 his-3 T10C6.12 Caenorhabditis elegans
WBGene00002005 hsp-1 F26D10.3 Caenorhabditis elegans
WBGene00002191 kin-3 B0205.7 Caenorhabditis elegans
WBGene00002957 let-858 F33A8.1 Caenorhabditis elegans
WBGene00003390 mog-2 H20J04.8 Caenorhabditis elegans
WBGene00004187 prp-8 C50C3.6 Caenorhabditis elegans
WBGene00004319 rbr-2 ZK593.4 Caenorhabditis elegans
WBGene00004798 sip-1 F43D9.4 Caenorhabditis elegans
WBGene00004806 skp-1 T27F2.1 Caenorhabditis elegans
WBGene00004914 snr-1 Y116A8C.42 Caenorhabditis elegans
WBGene00004915 snr-2 W08E3.1 Caenorhabditis elegans
WBGene00004916 snr-3 T28D9.10 Caenorhabditis elegans
WBGene00004919 snr-6 Y49E10.15 Caenorhabditis elegans
WBGene00006727 ubq-1 F25B5.4 Caenorhabditis elegans
WBGene00007413 pro-2 C07E3.2 Caenorhabditis elegans
WBGene00020423 prp-19 T10F2.4 Caenorhabditis elegans
WBGene00021369 siah-1 Y37E11AR.2 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013260 rsr-2 Y57A10A.19 Caenorhabditis elegans

0 Regulated By Molecule