WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed transcripts were identified using the edgeR Bioconductor package (Empirical analysis of digital gene expression data in R, v 3.0.8). FDR cutoff was set to < 0.05, which yielded lists of genes with > 4-fold difference in expression. Description  Genes that showed significantly increased expression 30 hours after infection by Nematocida parisii in fer-15(b26); fem-1(hc17), according to RNAseq.
Primary Identifier  WBPaper00045401:N.parisii_30h_upregulated Regulated By Treatment  Microsporidia: Nematocida parisii

0 Anatomy Terms

103 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00004452 rpl-38 C06B8.8 Caenorhabditis elegans
WBGene00004453 rpl-39 C26F1.9 Caenorhabditis elegans
WBGene00004810 skr-4 Y60A3A.18 Caenorhabditis elegans
WBGene00004811 skr-5 F47H4.10 Caenorhabditis elegans
WBGene00006710 ubc-15 Y110A2AR.2 Caenorhabditis elegans
WBGene00007097 B0024.4 B0024.4 Caenorhabditis elegans
WBGene00007659 pals-5 C17H1.6 Caenorhabditis elegans
WBGene00008267 C53A5.9 C53A5.9 Caenorhabditis elegans
WBGene00008269 C53A5.11 C53A5.11 Caenorhabditis elegans
WBGene00008602 oac-14 F09B9.1 Caenorhabditis elegans
WBGene00008850 F15B9.6 F15B9.6 Caenorhabditis elegans
WBGene00009166 F26F2.1 F26F2.1 Caenorhabditis elegans
WBGene00009168 F26F2.3 F26F2.3 Caenorhabditis elegans
WBGene00009908 F49H6.5 F49H6.5 Caenorhabditis elegans
WBGene00012101 zip-10 T27F2.4 Caenorhabditis elegans
WBGene00012726 Y39G8B.5 Y39G8B.5 Caenorhabditis elegans
WBGene00012757 Y41C4A.11 Y41C4A.11 Caenorhabditis elegans
WBGene00012910 Y46G5A.20 Y46G5A.20 Caenorhabditis elegans
WBGene00012961 Y47H10A.5 Y47H10A.5 Caenorhabditis elegans
WBGene00014046 clec-60 ZK666.6 Caenorhabditis elegans
WBGene00014047 clec-61 ZK666.7 Caenorhabditis elegans
WBGene00015455 txt-9 C04G6.5 Caenorhabditis elegans
WBGene00015755 C14B9.10 C14B9.10 Caenorhabditis elegans
WBGene00016912 clec-86 C54D1.2 Caenorhabditis elegans
WBGene00017667 ttr-37 F21E9.3 Caenorhabditis elegans
WBGene00018646 mul-1 F49F1.6 Caenorhabditis elegans
WBGene00018911 F56A4.3 F56A4.3 Caenorhabditis elegans
WBGene00020228 T05A8.2 T05A8.2 Caenorhabditis elegans
WBGene00020326 math-38 T07H3.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule