WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Microarray chip data was collected and analyzed by both Affymetrix MAS 5.0 suite software (>= 1.6-fold change in mRNA expression) and Robust Multichip Average (RMA) (>= 1.2-fold change in mRNA expression) as part of the Partek genomics suite software package, all with a p-value less than or equal to 0.05. Normalized data was further analyzed and visualized with Genespring software (Agilent Technologies, Santa Clara, CA). Description  Genes that showed decreased expression in nhr-23 RNAi experiment.
Primary Identifier  WBPaper00040185:nhr-23(RNAi)_downregulated

0 Anatomy Terms

268 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000034 abu-11 T01D1.6 Caenorhabditis elegans
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000697 col-123 W08D2.6 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000882 cyn-6 F42G9.2 Caenorhabditis elegans
WBGene00000902 daf-6 F31F6.5 Caenorhabditis elegans
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00000992 dhs-29 F27D9.6 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001067 dpy-5 F27C1.8 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001070 dpy-8 C31H2.2 Caenorhabditis elegans
WBGene00001071 dpy-9 T21D12.2 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001079 dpy-20 T22B3.1 Caenorhabditis elegans
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans
WBGene00001470 baz-2 ZK783.4 Caenorhabditis elegans
WBGene00001478 fmo-3 Y39A1A.19 Caenorhabditis elegans
WBGene00001479 fmo-4 F53F4.5 Caenorhabditis elegans
WBGene00001570 gei-13 F58A4.11 Caenorhabditis elegans
WBGene00001633 gly-8 Y66A7A.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003622 nhr-23 C01H6.5 Caenorhabditis elegans

0 Regulated By Molecule