WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  This analysis uses Cufflinks-Cuffdiff to quantify and identify transcripts with a significant level of expression between different conditions. Description  Genes that showed significantly increased expression level in prp-8(RNAi) animals comparing to in gfp(RNAi) control, according to RNAseq analysis.
Primary Identifier  WBPaper00042477:prp-8(RNAi)_upregulated_RNAseq
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0 Anatomy Terms

183 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000120 aly-1 C01F6.5 Caenorhabditis elegans
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans
WBGene00000155 app-1 W03G9.4 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000235 baf-1 B0464.7 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
WBGene00000884 cyn-8 D1009.2 Caenorhabditis elegans
WBGene00001040 dnj-22 T23B12.7 Caenorhabditis elegans
WBGene00001137 eat-6 B0365.3 Caenorhabditis elegans
WBGene00001166 eftu-2 ZK328.2 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001513 gad-1 T05H4.14 Caenorhabditis elegans
WBGene00001772 gst-24 F37B1.1 Caenorhabditis elegans
WBGene00002005 hsp-1 F26D10.3 Caenorhabditis elegans
WBGene00002024 hsp-43 C14F11.5 Caenorhabditis elegans
WBGene00002047 icp-1 Y39G10AR.13 Caenorhabditis elegans
WBGene00002275 lem-2 W01G7.5 Caenorhabditis elegans
WBGene00002280 let-2 F01G12.5 Caenorhabditis elegans
WBGene00002915 let-805 H19M22.2 Caenorhabditis elegans
WBGene00003062 lpd-6 K09H9.6 Caenorhabditis elegans
WBGene00003096 lys-7 C02A12.4 Caenorhabditis elegans
WBGene00003151 mca-1 W09C2.3 Caenorhabditis elegans
WBGene00003392 mog-4 C04H5.6 Caenorhabditis elegans
WBGene00003393 mog-5 EEED8.5 Caenorhabditis elegans
WBGene00003412 mrp-6 F20B6.3 Caenorhabditis elegans
WBGene00003418 msh-2 H26D21.2 Caenorhabditis elegans
WBGene00003472 mtk-1 B0414.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004187 prp-8 C50C3.6 Caenorhabditis elegans

0 Regulated By Molecule