WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Database searches using the monoisotopic peptide masses were undertaken using the Protein Prospector V3.2.1 MS-Fit program . Peptide modifications allowed during the search were: carboxymethylation of cysteines, oxidation of methionines, acetylation of peptide N-terminus and modification of peptide N-terminal Glu to pyroGlu. The maximum number of missed cleavages was set to 1 and the mass tolerance was limited to either 20 or 50 ppm. Description  Proteins that physically interact with GST-5 in ROS (reactive oxygen stressed) condition, according to proteomic study after affinity purification, 2D-electrophoresis.
Primary Identifier  WBPaper00024245:gst-5-binding_ROS-stressed

0 Anatomy Terms

8 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001095 dars-2 F10C2.6 Caenorhabditis elegans
WBGene00002335 let-60 ZK792.6 Caenorhabditis elegans
WBGene00003951 pbs-5 K05C4.1 Caenorhabditis elegans
WBGene00006963 xpa-1 K07G5.2 Caenorhabditis elegans
WBGene00015203 cdk-11.1 B0495.2 Caenorhabditis elegans
WBGene00018307 dyla-1 F41G4.1 Caenorhabditis elegans
WBGene00015851 gldi-6 C16C8.13 Caenorhabditis elegans
WBGene00020747 T24A6.7 T24A6.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans

0 Regulated By Molecule