WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Expression data were read in the statistical programming environment R and processed for background correction and quantile normalization and summarized for genes that differed in expression >= 1.5-fold (N2 versus nhr-8) and a p value <= 0.01 using the Limma package. Description  Genes that showed increased expression in nhr-8(hd117) comparing to N2.
Primary Identifier  WBPaper00044030:nhr-8(hd117)_upregulated

0 Anatomy Terms

328 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000268 bre-3 B0464.4 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00000977 dhs-14 R05D8.8 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001395 fat-3 W08D2.4 Caenorhabditis elegans
WBGene00001496 frm-10 F25H9.5 Caenorhabditis elegans
WBGene00001506 fut-2 EGAP9.2 Caenorhabditis elegans
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans
WBGene00001591 glc-1 F11A5.10 Caenorhabditis elegans
WBGene00001638 gly-13 B0416.6 Caenorhabditis elegans
WBGene00001768 gst-20 Y48E1B.10 Caenorhabditis elegans
WBGene00002035 hum-1 F29D10.4 Caenorhabditis elegans
WBGene00002271 lec-8 R07B1.10 Caenorhabditis elegans
WBGene00002273 lec-10 W01A11.4 Caenorhabditis elegans
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
WBGene00003092 lys-3 Y22F5A.6 Caenorhabditis elegans
WBGene00003480 klf-3 F54H5.4 Caenorhabditis elegans
WBGene00003640 nhr-50 C06C6.5 Caenorhabditis elegans
WBGene00003653 nhr-63 C06C6.4 Caenorhabditis elegans
WBGene00003688 nhr-98 M02H5.6 Caenorhabditis elegans
WBGene00003689 nhr-99 M02H5.1 Caenorhabditis elegans
WBGene00003702 nhr-112 Y70C5C.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003607 nhr-8 F33D4.1 Caenorhabditis elegans

0 Regulated By Molecule