WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The EdgeR package v 3.24.0 was used to determine fold changes (Fc) and false discovery rates (FDR) of differential transcript abundances. (FDR < 0.05 AND Fc > 4). Description  Transcripts that showed significantly increased expression in strain GW1125 [lsm-8(-/-)] comparing to WT N2 at L1 larva stage.
Primary Identifier  WBPaper00059527:lsm-1_upregulated_L1
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0 Anatomy Terms

148 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000676 col-102 C18H7.3 Caenorhabditis elegans
WBGene00000782 cpr-2 F36D3.9 Caenorhabditis elegans
WBGene00001919 his-45 B0035.10 Caenorhabditis elegans
WBGene00002103 ins-20 ZK84.7 Caenorhabditis elegans
WBGene00003671 nhr-81 C47F8.8 Caenorhabditis elegans
WBGene00003995 pgp-1 K08E7.9 Caenorhabditis elegans
WBGene00004177 srlf-37 ZK488.7 Caenorhabditis elegans
WBGene00005289 srh-68 T21B4.5 Caenorhabditis elegans
WBGene00005350 srh-133 Y59A8B.3 Caenorhabditis elegans
WBGene00005408 srh-195 R52.7 Caenorhabditis elegans
WBGene00005433 srh-223 F47C12.3 Caenorhabditis elegans
WBGene00005464 srh-258 T06E6.7 Caenorhabditis elegans
WBGene00005479 srh-274 C32B5.2 Caenorhabditis elegans
WBGene00005626 srj-44 T03D3.11 Caenorhabditis elegans
WBGene00005627 srj-45 T03D3.6 Caenorhabditis elegans
WBGene00005708 sru-45 Y32B12B.7 Caenorhabditis elegans
WBGene00005753 srw-6 H10D18.3 Caenorhabditis elegans
WBGene00005832 srw-85 C25F9.1 Caenorhabditis elegans
WBGene00005950 srx-59 T07H8.3 Caenorhabditis elegans
WBGene00006125 str-61 F14F8.1 Caenorhabditis elegans
WBGene00006128 str-66 Y73C8C.5 Caenorhabditis elegans
WBGene00006133 str-71 T23F1.4 Caenorhabditis elegans
WBGene00006142 str-83 B0213.7 Caenorhabditis elegans
WBGene00006259 str-228 C07G3.5 Caenorhabditis elegans
WBGene00006274 str-247 B0213.9 Caenorhabditis elegans
WBGene00006611 tre-5 C23H3.7 Caenorhabditis elegans
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
WBGene00007097 B0024.4 B0024.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003076 lsm-1 F40F8.9 Caenorhabditis elegans

0 Regulated By Molecule