WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DEXSeq (version 1.2.0) was used for differential expression analysis, with FDR cutoff of <0.01 and a minimum fold change requirement of 2-fold and excluded transcripts with <10 read counts. Description  Transcripts less abundant in puf-8(q725) fbf-1(ok91);lip-1(zh15) than in puf-8(q725);lip-1(zh15).
Primary Identifier  WBPaper00045618:fbf-1_downregulated
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0 Anatomy Terms

132 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000465 cpg-1 C07G2.1 Caenorhabditis elegans
WBGene00000616 col-39 C09G5.4 Caenorhabditis elegans
WBGene00000714 col-141 T15B7.5 Caenorhabditis elegans
WBGene00000720 col-147 T06E4.4 Caenorhabditis elegans
WBGene00000722 col-149 B0024.1 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
WBGene00001401 fbf-1 H12I13.4 Caenorhabditis elegans
WBGene00001569 meg-3 F52D2.4 Caenorhabditis elegans
WBGene00001595 gld-1 T23G11.3 Caenorhabditis elegans
WBGene00001862 him-3 ZK381.1 Caenorhabditis elegans
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
WBGene00003184 mei-2 F57B10.12 Caenorhabditis elegans
WBGene00003229 mex-3 F53G12.5 Caenorhabditis elegans
WBGene00003230 mex-5 W02A2.7 Caenorhabditis elegans
WBGene00003231 mex-6 AH6.5 Caenorhabditis elegans
WBGene00003434 msp-38 K08F4.8 Caenorhabditis elegans
WBGene00003448 msp-55 C09B9.6 Caenorhabditis elegans
WBGene00003764 nlp-26 Y43F8C.2 Caenorhabditis elegans
WBGene00003865 oma-2 ZC513.6 Caenorhabditis elegans
WBGene00003995 pgp-1 K08E7.9 Caenorhabditis elegans
WBGene00004027 pie-1 Y49E10.14 Caenorhabditis elegans
WBGene00004078 pos-1 F52E1.1 Caenorhabditis elegans
WBGene00004239 puf-3 Y45F10A.2 Caenorhabditis elegans
WBGene00004241 puf-5 F54C9.8 Caenorhabditis elegans
WBGene00004374 rme-2 T11F8.3 Caenorhabditis elegans
WBGene00004984 spn-4 ZC404.8 Caenorhabditis elegans
WBGene00006394 taf-11.2 K10D3.3 Caenorhabditis elegans
WBGene00006619 try-1 ZK546.15 Caenorhabditis elegans
WBGene00007053 chd-7 T04D1.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001401 fbf-1 H12I13.4 Caenorhabditis elegans

0 Regulated By Molecule