WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed genes (DEGs) were identified with a random-variance t-test and an SAM (Significance Analysis of Microarrays) test. Gene expression differences were considered statistically significant if their p-value was less than 0.05, the false discovery rate less than 0.3 and the fold-change compared to control at least <= 0.67 or >= 1.5. Description  mRNAs that showed decreased expression after 100ug\/L microcystin-LR exposure.
Primary Identifier  WBPaper00045807:microcystin-LR_downregulated

0 Anatomy Terms

71 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003086 lst-4 Y37A1B.2 Caenorhabditis elegans
WBGene00003760 nlp-22 T24D8.3 Caenorhabditis elegans
WBGene00004088 ppk-2 Y48G9A.8 Caenorhabditis elegans
WBGene00004155 pqn-73 W01C9.3 Caenorhabditis elegans
WBGene00004301 ram-5 T24C2.1 Caenorhabditis elegans
WBGene00004777 ser-2 C02D4.2 Caenorhabditis elegans
WBGene00005079 srd-1 F33H1.5 Caenorhabditis elegans
WBGene00005246 srh-21 C02E7.2 Caenorhabditis elegans
WBGene00005309 srh-88 C44C3.9 Caenorhabditis elegans
WBGene00005328 srh-109 T19C9.4 Caenorhabditis elegans
WBGene00005424 srh-214 T20B3.4 Caenorhabditis elegans
WBGene00005800 srw-53 T05G11.7 Caenorhabditis elegans
WBGene00005876 srw-129 C44C3.2 Caenorhabditis elegans
WBGene00006226 str-182 C12D8.12 Caenorhabditis elegans
WBGene00006662 twk-7 F22B7.7 Caenorhabditis elegans
WBGene00007247 C01G12.7 C01G12.7 Caenorhabditis elegans
WBGene00007638 C17D12.3 C17D12.3 Caenorhabditis elegans
WBGene00007768 C27C7.5 C27C7.5 Caenorhabditis elegans
WBGene00009670 F43G9.8 F43G9.8 Caenorhabditis elegans
WBGene00009722 F45D3.2 F45D3.2 Caenorhabditis elegans
WBGene00011249 semi-1 R11G10.2 Caenorhabditis elegans
WBGene00011643 slc-17.9 T09B9.2 Caenorhabditis elegans
WBGene00012013 ugt-54 T25B9.7 Caenorhabditis elegans
WBGene00012174 W01B6.8 W01B6.8 Caenorhabditis elegans
WBGene00012329 sre-44 W07G1.2 Caenorhabditis elegans
WBGene00012621 Y38H6C.8 Y38H6C.8 Caenorhabditis elegans
WBGene00012725 sre-47 Y39G8B.4 Caenorhabditis elegans
WBGene00013006 lin-38 Y48E1B.7 Caenorhabditis elegans
WBGene00013739 spin-4 Y111B2A.19 Caenorhabditis elegans
WBGene00014156 ZK930.6 ZK930.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
Microcystin-LR WBMol:00003468