WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  limma-voom in which undetected and lowly expressed genes (CPM of less than one) were filtered out. FDR < 0.05 and fold change > 2. Description  Transcripts that showed significantly decreased expression in pnp-1(jy90) comparing to in N2 animals.
Primary Identifier  WBPaper00061319:pnp-1(jy90)_downregulated
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0 Anatomy Terms

5 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006897 ver-4 F59F3.5 Caenorhabditis elegans
WBGene00007963 cyp-25A1 C36A4.1 Caenorhabditis elegans
WBGene00013007 Y48E1B.8 Y48E1B.8 Caenorhabditis elegans
WBGene00020992 W03F8.2 W03F8.2 Caenorhabditis elegans
WBGene00014134 ZK896.3 ZK896.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019298 pnp-1 K02D7.1 Caenorhabditis elegans

0 Regulated By Molecule