WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  T-test was performed to sequentially filter out genes with unreliable signal level between replicates (P < 0.05) and then to collect genes with significant signal level between samples (P < 0.05). Finally, genes were filtered for fold change (>2-fold up or <0.5-fold down). Description  Commonly over-expressed genes in rrf-3(pk1426) and eri-1(mg366) mutants vs. N2.
Primary Identifier  WBPaper00031070:rrf-3_eri-1_upregulated
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0 Anatomy Terms

68 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000830 ctl-1 Y54G11A.6 Caenorhabditis elegans
WBGene00002206 kin-24 K07F5.4 Caenorhabditis elegans
WBGene00003562 ncr-2 F09G8.4 Caenorhabditis elegans
WBGene00004084 pph-2 C29E6.3 Caenorhabditis elegans
WBGene00007307 spch-1 C04G2.8 Caenorhabditis elegans
WBGene00007335 C05C12.1 C05C12.1 Caenorhabditis elegans
WBGene00007732 spe-44 C25G4.4 Caenorhabditis elegans
WBGene00007733 smz-1 C25G4.6 Caenorhabditis elegans
WBGene00008772 irld-4 F13G11.2 Caenorhabditis elegans
WBGene00009101 F25B3.4 F25B3.4 Caenorhabditis elegans
WBGene00010035 F54C8.1 F54C8.1 Caenorhabditis elegans
WBGene00010155 mstr-2 F56F3.4 Caenorhabditis elegans
WBGene00010241 F58D2.2 F58D2.2 Caenorhabditis elegans
WBGene00010634 K07F5.6 K07F5.6 Caenorhabditis elegans
WBGene00011039 R05H5.4 R05H5.4 Caenorhabditis elegans
WBGene00011322 irld-14 T01C3.5 Caenorhabditis elegans
WBGene00011808 T16G12.7 T16G12.7 Caenorhabditis elegans
WBGene00011910 alg-3 T22B3.2 Caenorhabditis elegans
WBGene00012169 ttbk-4 W01B6.2 Caenorhabditis elegans
WBGene00012219 W03C9.1 W03C9.1 Caenorhabditis elegans
WBGene00012402 sfxn-1.3 Y6E2A.9 Caenorhabditis elegans
WBGene00012627 Y38H6C.15 Y38H6C.15 Caenorhabditis elegans
WBGene00012638 Y38H8A.4 Y38H8A.4 Caenorhabditis elegans
WBGene00013220 ctl-3 Y54G11A.13 Caenorhabditis elegans
WBGene00013712 dlc-6 Y106G6G.3 Caenorhabditis elegans
WBGene00013978 ZK507.1 ZK507.1 Caenorhabditis elegans
WBGene00014048 ZK666.8 ZK666.8 Caenorhabditis elegans
WBGene00015049 B0218.5 B0218.5 Caenorhabditis elegans
WBGene00016053 ptp-5.1 C24D10.1 Caenorhabditis elegans
WBGene00016085 C25A8.5 C25A8.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

2 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001332 eri-1 T07A9.5 Caenorhabditis elegans
WBGene00004510 rrf-3 F10B5.7 Caenorhabditis elegans

0 Regulated By Molecule