WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using DESeq2 v1.6.3 in R version 3.2.3. All analyses were performed with genes that had average expression level above 1 RPKM (fragments per kilobase per million, as calculated by Cufflinks). Description  Transcripts that showed significantly decreased expression (fold change > 2, adjusted p-value < 0.05) in dpy-27(RNAi) comparing to in control animals (N2 injected with vector RNAi).
Primary Identifier  WBPaper00050193:dpy-27(RNAi)_downregulated_L1

0 Anatomy Terms

51 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001906 his-32 F17E9.10 Caenorhabditis elegans
WBGene00002055 ifc-1 F37B4.2 Caenorhabditis elegans
WBGene00003098 lys-9 C54C8.6 Caenorhabditis elegans
WBGene00003658 nhr-68 H12C20.3 Caenorhabditis elegans
WBGene00003689 nhr-99 M02H5.1 Caenorhabditis elegans
WBGene00005188 srg-31 T07H8.5 Caenorhabditis elegans
WBGene00006628 tsp-2 C02F5.11 Caenorhabditis elegans
WBGene00007331 pho-11 C05C10.4 Caenorhabditis elegans
WBGene00007479 C09F9.2 C09F9.2 Caenorhabditis elegans
WBGene00007963 cyp-25A1 C36A4.1 Caenorhabditis elegans
WBGene00008044 C40H1.9 C40H1.9 Caenorhabditis elegans
WBGene00008102 C44H9.7 C44H9.7 Caenorhabditis elegans
WBGene00008341 ttr-44 C56A3.2 Caenorhabditis elegans
WBGene00008634 F10A3.4 F10A3.4 Caenorhabditis elegans
WBGene00008988 F20G2.5 F20G2.5 Caenorhabditis elegans
WBGene00009773 lipl-2 F46B6.8 Caenorhabditis elegans
WBGene00010034 F54B11.11 F54B11.11 Caenorhabditis elegans
WBGene00011167 chil-23 R09D1.11 Caenorhabditis elegans
WBGene00011397 T03E6.8 T03E6.8 Caenorhabditis elegans
WBGene00012501 Y26D4A.3 Y26D4A.3 Caenorhabditis elegans
WBGene00012518 comt-2 Y32B12A.3 Caenorhabditis elegans
WBGene00012608 hphd-1 Y38F1A.6 Caenorhabditis elegans
WBGene00014046 clec-60 ZK666.6 Caenorhabditis elegans
WBGene00015932 C17H12.6 C17H12.6 Caenorhabditis elegans
WBGene00018760 irg-3 F53E10.4 Caenorhabditis elegans
WBGene00019029 F58B6.1 F58B6.1 Caenorhabditis elegans
WBGene00019368 txt-4 K03H6.2 Caenorhabditis elegans
WBGene00019549 K09C4.4 K09C4.4 Caenorhabditis elegans
WBGene00019550 K09C4.5 K09C4.5 Caenorhabditis elegans
WBGene00020182 ugt-53 T03D3.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001086 dpy-27 R13G10.1 Caenorhabditis elegans

0 Regulated By Molecule