WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Bowtie 0.12.7, Tophat 1.3.3 and Cufflinks 1.2.0 were used to analyze the data and identify differentially expressed genes (DEGs). Description  Genes that showed significantly increased expression in ZK1236.1(tm4178) comparing to in N2 according to RNAseq analysis.
Primary Identifier  WBPaper00045303:ZK1236.1(tm4178)_upregulated
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0 Anatomy Terms

96 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000421 ced-7 C48B4.4 Caenorhabditis elegans
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans
WBGene00000707 col-133 F52B11.4 Caenorhabditis elegans
WBGene00000786 cpr-6 C25B8.3 Caenorhabditis elegans
WBGene00000788 cpz-1 F32B5.8 Caenorhabditis elegans
WBGene00000829 ctb-1 MTCE.21 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00002063 ife-5 Y57A10A.30 Caenorhabditis elegans
WBGene00002196 kin-10 T01G9.6 Caenorhabditis elegans
WBGene00003096 lys-7 C02A12.4 Caenorhabditis elegans
WBGene00006561 tcl-2 Y38C1AA.4 Caenorhabditis elegans
WBGene00007303 rnh-1.3 C04F12.9 Caenorhabditis elegans
WBGene00007331 pho-11 C05C10.4 Caenorhabditis elegans
WBGene00007646 nkb-1 C17E4.9 Caenorhabditis elegans
WBGene00008682 lex-1 F11A10.1 Caenorhabditis elegans
WBGene00009224 F28F8.7 F28F8.7 Caenorhabditis elegans
WBGene00009430 F35E12.6 F35E12.6 Caenorhabditis elegans
WBGene00010296 dgat-2 F59A1.10 Caenorhabditis elegans
WBGene00010364 ecps-2 H04D03.3 Caenorhabditis elegans
WBGene00010440 ttr-51 JC8.8 Caenorhabditis elegans
WBGene00010960 atp-6 MTCE.12 Caenorhabditis elegans
WBGene00010962 ctc-3 MTCE.23 Caenorhabditis elegans
WBGene00010964 ctc-1 MTCE.26 Caenorhabditis elegans
WBGene00010965 ctc-2 MTCE.31 Caenorhabditis elegans
WBGene00010989 R03D7.2 R03D7.2 Caenorhabditis elegans
WBGene00011172 R09E10.2 R09E10.2 Caenorhabditis elegans
WBGene00011276 aakg-5 R53.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022862 ZK1236.1 ZK1236.1 Caenorhabditis elegans

0 Regulated By Molecule