WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  EdgeR provides statistical routines for determining differential expression in digital gene expression data using a model based on the negative binomial distribution. The resulting p-values were adjusted using the Benjamini and Hochbergs approach for controlling the false discovery rate (FDR). Transcripts with an adjusted p-value smaller 0.05 were assigned as differentially expressed. Description  Genes with decreased RNA expression after 10 days of rotenone treatment
Primary Identifier  WBPaper00044426:rotenone_10day_downregulated

0 Anatomy Terms

23 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001603 gln-2 K03H1.1 Caenorhabditis elegans
WBGene00006449 alg-4 ZK757.3 Caenorhabditis elegans
WBGene00007987 C36H8.1 C36H8.1 Caenorhabditis elegans
WBGene00010254 F58E6.5 F58E6.5 Caenorhabditis elegans
WBGene00010510 ent-3 K02E11.1 Caenorhabditis elegans
WBGene00011401 T03F6.6 T03F6.6 Caenorhabditis elegans
WBGene00013771 Y113G7C.1 Y113G7C.1 Caenorhabditis elegans
WBGene00013855 cubn-1 ZC116.3 Caenorhabditis elegans
WBGene00015688 C10G11.8 C10G11.8 Caenorhabditis elegans
WBGene00016447 msd-4 C35D10.11 Caenorhabditis elegans
WBGene00019785 M70.3 M70.3 Caenorhabditis elegans
WBGene00020414 T10E9.4 T10E9.4 Caenorhabditis elegans
WBGene00020841 T27A3.5 T27A3.5 Caenorhabditis elegans
WBGene00021007 W03F11.4 W03F11.4 Caenorhabditis elegans
WBGene00017851 F27C1.1 F27C1.1 Caenorhabditis elegans
WBGene00022751 msrp-2 ZK484.5 Caenorhabditis elegans
WBGene00006044 ssp-16 T27A3.3 Caenorhabditis elegans
WBGene00016351 C33F10.1 C33F10.1 Caenorhabditis elegans
WBGene00014169 ZK945.7 ZK945.7 Caenorhabditis elegans
WBGene00014179 ZK1010.5 ZK1010.5 Caenorhabditis elegans
WBGene00006051 ssq-2 T28H11.5 Caenorhabditis elegans
WBGene00007308 nsph-3.2 C04G2.9 Caenorhabditis elegans
WBGene00011176 R09E10.6 R09E10.6 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
rotenone WBMol:00004310