WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Database searches using the monoisotopic peptide masses were undertaken using the Protein Prospector V3.2.1 MS-Fit program . Peptide modifications allowed during the search were: carboxymethylation of cysteines, oxidation of methionines, acetylation of peptide N-terminus and modification of peptide N-terminal Glu to pyroGlu. The maximum number of missed cleavages was set to 1 and the mass tolerance was limited to either 20 or 50 ppm. Description  Proteins that physically interact with GST-5 in N2 control condition, according to proteomic study after affinity purification, 2D-electrophoresis.
Primary Identifier  WBPaper00024245:gst-5-binding_control

0 Anatomy Terms

15 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000461 ceh-40 F17A2.5 Caenorhabditis elegans
WBGene00002178 jnk-1 B0478.1 Caenorhabditis elegans
WBGene00003014 lin-28 F02E9.2 Caenorhabditis elegans
WBGene00003043 lip-1 C05B10.1 Caenorhabditis elegans
WBGene00003590 nex-3 C28A5.3 Caenorhabditis elegans
WBGene00004501 rpt-1 C52E4.4 Caenorhabditis elegans
WBGene00010554 mlc-6 K04C1.4 Caenorhabditis elegans
WBGene00012462 Y17G7B.8 Y17G7B.8 Caenorhabditis elegans
WBGene00013086 arrd-2 Y51B9A.4 Caenorhabditis elegans
WBGene00015975 cas-2 C18E3.6 Caenorhabditis elegans
WBGene00017166 aldo-2 F01F1.12 Caenorhabditis elegans
WBGene00017752 sdz-15 F23F12.4 Caenorhabditis elegans
WBGene00018362 ppm-1.G F42G9.1 Caenorhabditis elegans
WBGene00021204 fbxb-77 Y17G9B.7 Caenorhabditis elegans
WBGene00018427 F44E7.5 F44E7.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans

0 Regulated By Molecule