WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The error threshold for peptide spectrum matches was set to a 1% false discovery rate (FDR). Protein expression was measured by the total of identified spectral counts normalized by the total number of spectral counts in each MS run in order to adjust for the variation in signal across runs. Description  Proteins that showed increased expression in clk-1(qm30) comparing to in N2, according to liquid chromatography and mass spectrometry analysis.
Primary Identifier  WBPaper00046217:clk-1(qm30)_upregulated

0 Anatomy Terms

20 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00001167 eef-2 F25H5.4 Caenorhabditis elegans
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00003052 lmn-1 DY3.2 Caenorhabditis elegans
WBGene00004258 pyc-1 D2023.2 Caenorhabditis elegans
WBGene00004408 rplp-0 F25H2.10 Caenorhabditis elegans
WBGene00004736 sca-1 K11D9.2 Caenorhabditis elegans
WBGene00006789 unc-54 F11C3.3 Caenorhabditis elegans
WBGene00007859 mrps-31 C32A3.2 Caenorhabditis elegans
WBGene00008538 sqrd-1 F02H6.5 Caenorhabditis elegans
WBGene00010052 F54D5.7 F54D5.7 Caenorhabditis elegans
WBGene00010440 ttr-51 JC8.8 Caenorhabditis elegans
WBGene00010790 adh-1 K12G11.3 Caenorhabditis elegans
WBGene00018237 irg-7 F40F4.6 Caenorhabditis elegans
WBGene00019900 vdac-1 R05G6.7 Caenorhabditis elegans
WBGene00019680 K12H4.5 K12H4.5 Caenorhabditis elegans
WBGene00017500 pud-2.2 F15E11.14 Caenorhabditis elegans
WBGene00012018 T25C12.3 T25C12.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000536 clk-1 ZC395.2 Caenorhabditis elegans

0 Regulated By Molecule