WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Pair-wise significance testing (mutant vs. wild-type) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Criteria for differential expression was set by employing log2(ratio) >= 0.848 and p-value < 0.001. Description  Differentially expressed genes in nhr-80(tm1011) compared to wild-type animals using microarray analysis.
Primary Identifier  WBPaper00040998:nhr-80_regulated

0 Anatomy Terms

36 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001398 fat-6 VZK822L.1 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001598 glh-1 T21G5.3 Caenorhabditis elegans
WBGene00002012 hsp-12.3 F38E11.1 Caenorhabditis elegans
WBGene00002048 ida-1 B0244.2 Caenorhabditis elegans
WBGene00004481 rps-12 F54E7.2 Caenorhabditis elegans
WBGene00004498 rps-29 B0412.4 Caenorhabditis elegans
WBGene00006536 tbb-1 K01G5.7 Caenorhabditis elegans
WBGene00007875 dod-24 C32H11.12 Caenorhabditis elegans
WBGene00008917 F17C11.6 F17C11.6 Caenorhabditis elegans
WBGene00009119 ndk-1 F25H2.5 Caenorhabditis elegans
WBGene00010034 F54B11.11 F54B11.11 Caenorhabditis elegans
WBGene00010476 rnf-113 K01G5.1 Caenorhabditis elegans
WBGene00010478 dkc-1 K01G5.5 Caenorhabditis elegans
WBGene00010481 K01G5.10 K01G5.10 Caenorhabditis elegans
WBGene00011668 clec-47 T09F5.9 Caenorhabditis elegans
WBGene00012481 Y18D10A.11 Y18D10A.11 Caenorhabditis elegans
WBGene00012664 Y39B6A.1 Y39B6A.1 Caenorhabditis elegans
WBGene00014003 ZK593.3 ZK593.3 Caenorhabditis elegans
WBGene00014046 clec-60 ZK666.6 Caenorhabditis elegans
WBGene00016670 ilys-3 C45G7.3 Caenorhabditis elegans
WBGene00016892 pgph-3 C53A3.2 Caenorhabditis elegans
WBGene00017688 ttr-35 F22A3.2 Caenorhabditis elegans
WBGene00019604 pgph-1 K09H11.7 Caenorhabditis elegans
WBGene00019730 asns-2 M02D8.4 Caenorhabditis elegans
WBGene00021337 clc-24 Y34F4.2 Caenorhabditis elegans
WBGene00005002 spp-17 C54G6.5 Caenorhabditis elegans
WBGene00019495 sdz-24 K07E8.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003670 nhr-80 H10E21.3 Caenorhabditis elegans

0 Regulated By Molecule