WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed genes were extracted using DESeq, version 1.10.1. Assembly: PRJNA13758.WBPS13 Description  Transcripts upregulated in F3 generation of transgenic C. elegans expressing human alpha-syn in DA neurons fed HB101 0E. coli vs. OP50.
Primary Identifier  WBPaper00065560:E.coli-HB101_upregulated_F3 Regulated By Treatment  Bacteria diet: E.coli HB101

0 Anatomy Terms

23 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005349 srh-132 T27C5.5 Caenorhabditis elegans
WBGene00006075 str-7 F22B8.5 Caenorhabditis elegans
WBGene00006175 str-124 T22H6.3 Caenorhabditis elegans
WBGene00007605 hrg-7 C15C8.3 Caenorhabditis elegans
WBGene00007864 irg-6 C32H11.1 Caenorhabditis elegans
WBGene00009706 argk-1 F44G3.2 Caenorhabditis elegans
WBGene00010473 hrg-2 K01D12.14 Caenorhabditis elegans
WBGene00012081 clc-21 T27C5.8 Caenorhabditis elegans
WBGene00015932 C17H12.6 C17H12.6 Caenorhabditis elegans
WBGene00016204 gsto-1 C29E4.7 Caenorhabditis elegans
WBGene00017553 nep-8 F18A12.4 Caenorhabditis elegans
WBGene00019146 H02F09.3 H02F09.3 Caenorhabditis elegans
WBGene00019214 H20E11.2 H20E11.2 Caenorhabditis elegans
WBGene00019471 cyp-35B2 K07C6.3 Caenorhabditis elegans
WBGene00019547 K09C4.1 K09C4.1 Caenorhabditis elegans
WBGene00021585 clec-74 Y46C8AL.8 Caenorhabditis elegans
WBGene00235181 F35E12.13 F35E12.13 Caenorhabditis elegans
WBGene00206494 C15H11.16 C15H11.16 Caenorhabditis elegans
WBGene00007232 C01G10.5 C01G10.5 Caenorhabditis elegans
WBGene00009490 fbxa-99 F36G9.14 Caenorhabditis elegans
WBGene00009047 F22B8.4 F22B8.4 Caenorhabditis elegans
WBGene00010928 clec-258 M162.2 Caenorhabditis elegans
WBGene00044284 spp-21 T25C12.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage. 4-days post-L4 adult hermaphrodite Ce WBls:0000067

0 Processes

0 Regulated By Gene

0 Regulated By Molecule