WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 150 expressed in: XXX.
Primary Identifier  WBPaper00065623:150

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of two neurons, which have ciliated endings situated immediately dorsal to the lateral inner labial sensilla in the head but have no associated sheath or socket cells; they have flattened processes in this region of the cilium. FLP   WBbt:0006828
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. LUA   WBbt:0008031
Two embryonic hypodermal cells (XXXL, XXXR) that may provide a scaffold for the early organization of ventral bodywall muscles and the various socket cells in the lateral and ventral lips. Their cell bodies soon crawl posteriorly, and their processes separate the amphid nerve from the mechanosensory nerves in the late embryo. The XXX processes later retract, and the XXX cell bodies remain in the ventrolateral bodywall near the cell bodies of the posterior arcade and some socket cells where they perform a neurohumoral function, as they retain short processes bordering the pseudocoelom and contain some secretory vesicles. XXX cell   WBbt:0007855

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
WBGene00008663 eak-6 F10G8.4 Caenorhabditis elegans
WBGene00011392 sbt-1 T03D8.3 Caenorhabditis elegans
WBGene00017036 clc-31 D1069.1 Caenorhabditis elegans
WBGene00271414 ptp-10 T05A7.12 Caenorhabditis elegans
WBGene00020565 T19C3.7 T19C3.7 Caenorhabditis elegans
WBGene00008833 F14H8.2 F14H8.2 Caenorhabditis elegans
WBGene00008835 F14H8.5 F14H8.5 Caenorhabditis elegans
WBGene00008834 F14H8.4 F14H8.4 Caenorhabditis elegans
WBGene00007183 xxxp-1 B0462.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule