WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially regulated transcripts were determined by edgeR. For the microarray and NanoString analyses, genes were considered differentially regulated at FDR < 0.05 and log2 (Fold Change) > 1 or < 1. Description  Transcripts that showed significantly increased expression in pmk-1(km25) comparing to in N2.
Primary Identifier  WBPaper00050515:pmk-1(km25)_upregulated
Paste the following link
Lists
This ExpressionCluster isn't in any lists. Upload a list.

0 Anatomy Terms

8 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00000784 cpr-4 F44C4.3 Caenorhabditis elegans
WBGene00006539 tbb-6 T04H1.9 Caenorhabditis elegans
WBGene00021219 Y19D10A.4 Y19D10A.4 Caenorhabditis elegans
WBGene00021226 Y19D10A.11 Y19D10A.11 Caenorhabditis elegans
WBGene00021227 mct-1 Y19D10A.12 Caenorhabditis elegans
WBGene00044734 Y19D10A.16 Y19D10A.16 Caenorhabditis elegans
WBGene00021222 irld-53 Y19D10A.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans

0 Regulated By Molecule