WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Statistical Wald tests (lfcThreshold = 0.5) were performed in R with the DESeq2 package (v1.12.4). Differentially expressed genes were defined as having p-values corrected for multiple testing (Bonferroni) less than 0.1. Description  Transcripts that showed significantly decreased expression in jmjd-5(tm3735) after growing at 25C for six generations, comparing to in N2.
Primary Identifier  WBPaper00051338:jmjd-5(tm3735)_downregulated_G6
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0 Anatomy Terms

8 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001942 his-68 T23D8.6 Caenorhabditis elegans
WBGene00010492 meg-1 K02B9.1 Caenorhabditis elegans
WBGene00010555 K04C1.5 K04C1.5 Caenorhabditis elegans
WBGene00016953 C55C3.3 C55C3.3 Caenorhabditis elegans
WBGene00021270 pid-3 Y23H5A.3 Caenorhabditis elegans
WBGene00022854 cin-4 ZK1127.7 Caenorhabditis elegans
WBGene00021269 Y23H5A.2 Y23H5A.2 Caenorhabditis elegans
WBGene00019989 R09F10.8 R09F10.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007387 jmjd-5 C06H2.3 Caenorhabditis elegans

0 Regulated By Molecule