WormMine: ExpressionCluster WBPaper00048423:LP133_LF21_downregulated

• Algorithm: All data normalization and calculation of fold-changes in gene levels were performed using GeneSpring GX 7.3 (Agilent Technology). The averages of the normalized ratios were calculated by dividing the average of the normalized signal channel intensities by the average of the normalized control channel intensities.
• Description: Genes with decreased expression in response to heat-killed LP133 or LF21 cells compared with E. coli OP50 cells.
• Primary Identifier: WBPaper00048423:LP133_LF21_downregulated
• Regulated By Treatment: Bacteria diet: Lactobacillus plantarum LP133 or LF21. Approximately 200 three-day-old young adult worms were plated on OP50-conditioned dishes or OP50-conditioned dishes with heat-killed LP133 or LF21. Plates were incubated for 24 h at 16C; this process was repeated five times before harvesting the worms. After 24 h of treatment, RNA was isolated from four-day-old worms.

0 Anatomy Terms

6 Genes

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000251	bli-1	C09G5.6	Caenorhabditis elegans
WBGene00000620	col-43	ZC513.8	Caenorhabditis elegans
WBGene00000851	cut-1	C47G2.1	Caenorhabditis elegans
WBGene00001070	dpy-8	C31H2.2	Caenorhabditis elegans
WBGene00006948	wrt-2	F52E4.6	Caenorhabditis elegans
WBGene00008328	srz-43	C55A1.14	Caenorhabditis elegans

1 Life Stages

Remark	Definition	Other Name	Public Name	Primary Identifier
	At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage.		4-days post-L4 adult hermaphrodite Ce	WBls:0000067

0 Processes

0 Regulated By Gene

0 Regulated By Molecule