WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  After feature quantification with cuffquant v2.2.1, differential gene expression was done with Cuffdiff v2.2.1. Differentially expressed genes (q value < 0.05, false-discovery rate-adjusted P values of the test statistic) of each pairwise comparison were identified. Description  Mitochondrial transcripts that showed significntly decreased expression in nfyb-1(cu13), comparing to in N2.
Primary Identifier  WBPaper00060006:nfyb-1(cu13)_downregulated_transcript

0 Anatomy Terms

7 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000418 ced-4 C35D10.9 Caenorhabditis elegans
WBGene00006491 acl-3 ZK809.2 Caenorhabditis elegans
WBGene00008456 eral-1 E02H1.2 Caenorhabditis elegans
WBGene00014258 ZK1320.9 ZK1320.9 Caenorhabditis elegans
WBGene00020007 R11F4.1 R11F4.1 Caenorhabditis elegans
WBGene00020706 atg-9 T22H9.2 Caenorhabditis elegans
WBGene00021365 smgl-2 Y37E11AM.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021132 nfyb-1 W10D9.4 Caenorhabditis elegans

0 Regulated By Molecule