WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%. Description  Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E.
Primary Identifier  WBPaper00044246:pgrn-1_ced-1_upregulated

0 Anatomy Terms

9 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005003 spp-18 F27C8.4 Caenorhabditis elegans
WBGene00006084 str-16 Y73C8A.1 Caenorhabditis elegans
WBGene00016935 ifta-1 C54G7.4 Caenorhabditis elegans
WBGene00045246 C29E4.15 C29E4.15 Caenorhabditis elegans
WBGene00195142 M110.10 M110.10 Caenorhabditis elegans
WBGene00022653 ZK105.1 ZK105.1 Caenorhabditis elegans
WBGene00022656 ZK105.5 ZK105.5 Caenorhabditis elegans
WBGene00045261 H29C22.1 H29C22.1 Caenorhabditis elegans
WBGene00044638 F23A7.8 F23A7.8 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011936 pgrn-1 T22H2.6 Caenorhabditis elegans

0 Regulated By Molecule