WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 (v2.1.8.3) was used to determine DE genes and to generate principal component and scatter plots. DE genes with FDR < 0.05 were analysed using g:Profiler with Bonferroni correction. Description  Transcripts that showed significantly increased expression in set-2(zr2012) animals at embryo stage, comparing to in N2 animals.
Primary Identifier  WBPaper00060014:set-2(zr2012)_upregulated

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000165 aps-3 Y48G8AL.14 Caenorhabditis elegans
WBGene00000184 arf-6 Y116A8C.12 Caenorhabditis elegans
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans
WBGene00000236 bag-1 F57B10.11 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000247 bec-1 T19E7.3 Caenorhabditis elegans
WBGene00000293 cap-2 M106.5 Caenorhabditis elegans
WBGene00000377 cct-1 T05C12.7 Caenorhabditis elegans
WBGene00000378 cct-2 T21B10.7 Caenorhabditis elegans
WBGene00000379 cct-4 K01C8.10 Caenorhabditis elegans
WBGene00000428 ceh-1 F16H11.4 Caenorhabditis elegans
WBGene00000502 chp-1 Y110A7A.13 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000544 clp-3 Y47H10A.1 Caenorhabditis elegans
WBGene00000549 cls-2 R107.6 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000565 cnt-1 Y17G7B.15 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000624 col-47 Y18H1A.12 Caenorhabditis elegans
WBGene00000626 col-49 K09H9.3 Caenorhabditis elegans
WBGene00000640 col-64 F52F12.2 Caenorhabditis elegans
WBGene00000671 col-96 Y41C4A.19 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000708 col-135 M199.5 Caenorhabditis elegans
WBGene00000724 col-151 AC3.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004782 set-2 C26E6.9 Caenorhabditis elegans

0 Regulated By Molecule