WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing. Description  Genes up regulated in the dauer versus dauer-exit worms.
Primary Identifier  WBPaper00041207:CE_dauer_up

0 Anatomy Terms

466 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000108 alh-2 K04F1.15 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000135 amt-3 M195.3 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000276 byn-1 F57B9.5 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000559 cnc-5 R09B5.10 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00000682 col-108 Y41D4A.2 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00000980 dhs-17 F29G9.6 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001391 far-7 K01A2.2 Caenorhabditis elegans
WBGene00001440 fkh-8 F40H3.4 Caenorhabditis elegans
WBGene00001444 flp-1 F23B2.5 Caenorhabditis elegans
WBGene00001446 flp-3 W07E11.2 Caenorhabditis elegans
WBGene00001451 flp-8 F31F6.4 Caenorhabditis elegans
WBGene00001454 flp-11 K02G10.4 Caenorhabditis elegans
WBGene00001455 flp-12 C05E11.8 Caenorhabditis elegans
WBGene00001460 flp-17 C52D10.11 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001462 flp-19 M79.4 Caenorhabditis elegans
WBGene00001463 flp-20 E01H11.3 Caenorhabditis elegans
WBGene00001464 flp-21 C26F1.10 Caenorhabditis elegans
WBGene00001554 gcy-34 M04G12.3 Caenorhabditis elegans
WBGene00001591 glc-1 F11A5.10 Caenorhabditis elegans
WBGene00001751 gst-3 K08F4.11 Caenorhabditis elegans
WBGene00001763 gst-15 F37B1.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A third stage larva specialized for dispersal and long term survival. dauer larva Ce WBls:0000032

0 Processes

0 Regulated By Gene

0 Regulated By Molecule