WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in RICL, RICR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:RIC
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Ring interneuron RICL lineage name: ABplppaaaapp WBbt:0003941
Ring interneuron RICR lineage name: ABprppaaaapp WBbt:0003940

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000043 acr-3 K11G12.7 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000157 aps-2 F02E8.3 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000371 cox-5B F26E4.9 Caenorhabditis elegans
WBGene00000376 ccr-4 ZC518.3 Caenorhabditis elegans
WBGene00000439 ceh-16 C13G5.1 Caenorhabditis elegans
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000637 col-61 C01H6.1 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans
WBGene00001135 eat-4 ZK512.6 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001400 fax-1 F56E3.4 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001616 glr-5 ZC196.7 Caenorhabditis elegans
WBGene00001622 glt-4 T22E5.2 Caenorhabditis elegans
WBGene00001629 gly-4 Y116F11B.12 Caenorhabditis elegans
WBGene00001664 gpa-2 F38E1.5 Caenorhabditis elegans
WBGene00001691 grd-2 F46B3.5 Caenorhabditis elegans
WBGene00001772 gst-24 F37B1.1 Caenorhabditis elegans
WBGene00001842 her-1 ZK287.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule