WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in pm8 according to single cell RNAseq.
Primary Identifier  WBPaper00061340:pm8
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
eighth pharyngeal muscle cell layer (single cell) pm8 lineage name: MSaaapapp WBbt:0004302

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000245 bca-1 T13C5.5 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000287 cal-3 M02B7.6 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
WBGene00001187 egl-19 C48A7.1 Caenorhabditis elegans
WBGene00001398 fat-6 VZK822L.1 Caenorhabditis elegans
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans
WBGene00001466 gpla-1 F58H1.4 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001519 gar-3 Y40H4A.1 Caenorhabditis elegans
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans
WBGene00001539 gcy-13 F23H12.6 Caenorhabditis elegans
WBGene00001609 glp-1 F02A9.6 Caenorhabditis elegans
WBGene00001627 gly-2 C55B7.2 Caenorhabditis elegans
WBGene00001628 gly-3 ZK688.8 Caenorhabditis elegans
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
WBGene00001696 grd-7 F46H5.6 Caenorhabditis elegans
WBGene00001914 his-40 K03A1.1 Caenorhabditis elegans
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
WBGene00002043 hyl-1 C09G4.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule