WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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Expression Cluster :

Algorithm  The Cuffdiff Differential Gene Expression tool (version 0.0.5) was used to calculate differential gene expression using a false discovery rate of 0.05, a minimum alignment count of 100 and with bias correction to obtain gene and transcript expression level data along with fold change (in log2 scale) and P values (raw and corrected for multiple testing). Description  Transcripts that showed significantly increased expression by TCER-1 by comparing glp-1(e2141ts) with tcer-1(tm1452);glp-1(e2141ts) animals.
Primary Identifier  WBPaper00049217:TCER-1_upregulated

0 Anatomy Terms

212 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000247 bec-1 T19E7.3 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000652 col-76 M110.1 Caenorhabditis elegans
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans
WBGene00000731 col-158 D2023.7 Caenorhabditis elegans
WBGene00000793 crh-1 Y41C4A.4 Caenorhabditis elegans
WBGene00000967 dhs-3 T02E1.5 Caenorhabditis elegans
WBGene00000982 dhs-19 T11F9.11 Caenorhabditis elegans
WBGene00000985 dhs-22 C15H11.4 Caenorhabditis elegans
WBGene00000986 dhs-23 R08H2.1 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00001262 emb-8 K10D2.6 Caenorhabditis elegans
WBGene00001263 emb-9 K04H4.1 Caenorhabditis elegans
WBGene00001787 gst-39 Y53F4B.33 Caenorhabditis elegans
WBGene00002238 kars-1 T02G5.9 Caenorhabditis elegans
WBGene00002827 let-653 C29E6.1 Caenorhabditis elegans
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
WBGene00003474 mtl-2 T08G5.10 Caenorhabditis elegans
WBGene00003522 nas-3 K06A4.1 Caenorhabditis elegans
WBGene00003602 nhr-3 H01A20.1 Caenorhabditis elegans
WBGene00003732 nhx-4 F14B8.1 Caenorhabditis elegans
WBGene00003747 nlp-9 E03D2.2 Caenorhabditis elegans
WBGene00003847 blmp-1 F25D7.3 Caenorhabditis elegans
WBGene00003997 pgp-3 ZK455.7 Caenorhabditis elegans
WBGene00004003 pgp-9 C47A10.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022855 tcer-1 ZK1127.9 Caenorhabditis elegans

0 Regulated By Molecule