WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  A gene model was built based on the WS260 annotation. Tag counts for each gene were extracted from STAR aligned BAM files, anddifferential gene expression between N2 and mutant backgrounds was tested using DESeq2. A false discovery rate(FDR) < 0.01 and LFC > 0.5849 was used to define genes as upregulated, and FDR < 0.01 and LFC < -1 was used to define genes asdownregulated. Description  Transcripts that showed significantly decreased expression in lin-37(n758) comparing to in N2 animals at starved L1 larva stage.
Primary Identifier  WBPaper00062056:lin-37(n758)_downregulated

0 Anatomy Terms

292 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000024 abu-1 AC3.3 Caenorhabditis elegans
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000207 asb-2 F02E8.1 Caenorhabditis elegans
WBGene00000210 asg-2 C53B7.4 Caenorhabditis elegans
WBGene00000215 asp-2 T18H9.2 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000402 cdh-10 C45G7.5 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000729 col-156 F57B7.3 Caenorhabditis elegans
WBGene00000747 col-174 F46C8.2 Caenorhabditis elegans
WBGene00000749 col-176 ZC373.7 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000831 ctl-2 Y54G11A.5 Caenorhabditis elegans
WBGene00000879 cyn-3 Y75B12B.5 Caenorhabditis elegans
WBGene00000883 cyn-7 Y75B12B.2 Caenorhabditis elegans
WBGene00000929 dao-3 K07E3.3 Caenorhabditis elegans
WBGene00000967 dhs-3 T02E1.5 Caenorhabditis elegans
WBGene00000973 dhs-9 Y32H12A.3 Caenorhabditis elegans
WBGene00000993 dhs-30 T25G12.7 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001066 dpy-4 Y41E3.2 Caenorhabditis elegans
WBGene00001068 dpy-6 F16F9.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003022 lin-37 ZK418.4 Caenorhabditis elegans

0 Regulated By Molecule