WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00109089 Phenotype Remark  "ATFS-1, the transcription factor controlling hsp-6 activation [25] and PIFK-1 (this study) have not been detected as activators of cSADDs [3]. We therefore first tested whether RNAi with these genes triggers the aversion phenotype, that served as a readout for cSADDs [3]. RNAi of neither of both genes induced food aversion, whereas RNAi of elt-2, used as a control as described [3], did (Table 2)."
Remark  (Table 2) elt-2 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001250 elt-2 C33D3.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D3.1 C33D3.1 1302   X: 10481241-10481382

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000402 avoids bacterial lawn Lawn avoidance refers to behavior in which animals initially enter the bacterial lawn but later exit and remain near the edge of the bacteria. Lawn avoidance is often a response to bacterial food, that is pathogenic or low quality to the animal.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00043917

0 Strain