WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107863 Genotype  DYN-1::GFP
Phenotype Remark  "As described previously, DYN-1-GFP foci localize across the cortex before the onset of polarity establishment in wild-type embryos. The foci become enriched in the anterior and are maintained through cytokinesis (Figure 2C, control; Nakayama et_al, 2009). In arx-2 RNAi-treated embryos, the number of DYN-1-GFP-labeled foci at the cortex is reduced significantly (Figure 2, C and D; p values in legend). In addition, there is a reduction in the cytoplasmic background fluorescence observed. To determine whether the disruption in DYN-1-GFP foci to the cortex was specific to Arp2/3-regulated actin dynamics, we again disrupted WAVE function through gex-3 RNAi and quantified the number of DYN-1 foci at the cortex (Figure 2, C and D). We found that disruption of WAVE/SCAR function by gex-3 RNAi also significantly reduces the number of DYN-1-GFP cortical foci, similar to arx-2 RNAi, suggesting that localization of DYN-1 cortex relies on Arp2/3 and WAVE/SCAR-mediated actin dynamics." Remark  (Figure 2C,2D) arx-2 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000200 arx-2 K07C5.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C5.1 K07C5.1 1188   V: 10335776-10335949

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040933

0 Strain