WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107825 Phenotype Remark  Figure 3, unsealed phagosomes can be labeled by PLCδ1-PH and the membrane impermeable dye FM4-64. Loss of mtm-1, piki-1, lst-4, dyn-1 or ocrl-1 shows phagosome sealing defective. "Phagosomes in mtm-1(gk890934) and mtm-1 RNAi worms were all labeled by FM4-64, Annexin V, and PLCδ1-PH, indicating defects in phagosomal sealing (Fig 3, E-F'', L, and M; and Fig S3, D-D''', H, and I)."
Remark  mtm-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003475 mtm-1 Y110A7A.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.5 Y110A7A.5 1767   I: 5134767-5134806

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002394 phagosome sealing defective The closure of a phagosome does not occur and it remains connected with the plasma membrane, leaving the lumen open to the outside. Complete closure usually occurs once an apoptotic cell has been surrounded by an engulfing cell.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048406

0 Strain