WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00069896 Phenotype Remark  arrested as undifferentiated clusters of 80200 cells

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006577 tlf-1 F39H11.2 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39H11.2b F39H11.2b 1527   I: 8698316-8698372
CDS:F39H11.2a F39H11.2a 1518   I: 8698316-8698372

1 Laboratories

Primary Identifier
SM

4 Phenotype

Identifier Name Description
WBPhenotype:0000483 no gut granules Animals lack the different inclusions within the intestinal cytoplasm, including birefringent crystalline objects and other dark-staining endosomes. In C. elegans these contents typically include glycogen granules (polysaccharide storage), rhabditin (carbohydrate storage), yolk granules (lipid and protein), and concentrated waste products (Wormatlas).
WBPhenotype:0001136 embryonic morphology variant Animals exhibit variations in the form, structure or composition of any of its parts during any developmental stage ranging from zygote formation to hatching compared to control.
WBPhenotype:0000820 embryonic behavior variant Activity characteristic of an embryo is altered compared to control.
WBPhenotype:0000051 embryonic terminal arrest variable emb The developmental program does not continue past embryogenesis; stage of arrest is not consistent from animal to animal.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001301 P granule abnormal Localization or structural appearance of P-granules is altered compared to control. P-granules are cytoplasmic structures associated with germ nuclei in the C. elegans gonad, and are localized exclusively to germ cells, or germ cell precursors, throughout the life cycle.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004351

0 Strain