WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091595 Phenotype Remark  apr-1(RNAi) and mom-5(RNAi) mutually enhance each other's no-endoderm phenotype
Remark  (Table 2) apr-1, mom-5 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans
WBGene00003397 mom-5 T23D8.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G2.8c K04G2.8c 2679   I: 8050043-8050225
CDS:K04G2.8b K04G2.8b 3567   I: 8050043-8050225
CDS:T23D8.1a T23D8.1a 1707   I: 9965641-9966113
CDS:T23D8.1b T23D8.1b 1713   I: 9965641-9966113
CDS:K04G2.8a K04G2.8a 3561   I: 8050043-8050225

1 Laboratories

Primary Identifier
WM

1 Phenotype

Identifier Name Description
WBPhenotype:0000472 endoderm absent Animals lack the early blast cells that give rise to the gut tissue (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00002871

0 Strain