WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00099003 Phenotype Remark  96 percent of embryos lack endoderm.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003048 lit-1 W06F12.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06F12.1a W06F12.1a 1905   III: 13714045-13714184
CDS:W06F12.1e W06F12.1e 1365   III: 13718359-13718466
CDS:W06F12.1c W06F12.1c 1314   III: 13719664-13719720
CDS:W06F12.1b W06F12.1b 1389   III: 13718012-13718030
CDS:W06F12.1d W06F12.1d 1806   III: 13702192-13702246

1 Laboratories

Primary Identifier
WM

1 Phenotype

Identifier Name Description
WBPhenotype:0000472 endoderm absent Animals lack the early blast cells that give rise to the gut tissue (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00003656

0 Strain