WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00082742 Genotype  spn-4(or80)
Phenotype Remark  spn-4(or80);pal-1(RNAi) double mutant embryos failed to produce any body wall muscle cells, as indicated by undetectable levels of staining by the NE8 4C6.3 antibody

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003912 pal-1 C38D4.6 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38D4.6b C38D4.6b 807   III: 4805211-4805253
CDS:C38D4.6a C38D4.6a 813   III: 4805211-4805253
CDS:C38D4.6c C38D4.6c 669   III: 4805211-4805253

1 Laboratories

Primary Identifier
EU

2 Phenotype

Identifier Name Description
WBPhenotype:0000425 antibody staining reduced Any variation that results in a decrease in the characteristic expression of a gene product, as detected by antibody staining, compared to control animals.
WBPhenotype:0000861 body wall muscle development variant Any variation in the progression of the principal muscle cell type whose contractile activity generates body motion in the nematode over time compared to control. In C. elegans they consist of 95 unfused cells in the adult organized into four muscle quadrants. Their sarcomeres are obliquely striated and lie lengthwise along the body wall (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004995

0 Strain