WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00090741 Phenotype Remark  The lifespan of worms from the F1, F2 and F3 generations in which ash-2 had been knocked down only in the P0 parental generation was significantly extended compared to that of descendants of worms treated with empty vector control in the P0 parental generation. By contrast, F4 generation descendants no longer had extended lifespan. Histone H3 Lysine 4 trimethylation (H3K4me3) levels were reduced in the P0 generation but not in subsequent generations, as determined by Western blot and antibody staining of ash-2 RNAi-treated animals.
Remark  (Figure 3D-H, S7A,B,C, Table S2) ash-2 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012458 ash-2 Y17G7B.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.2a Y17G7B.2a 1713   II: 11980475-11980545
CDS:Y17G7B.2e Y17G7B.2e 1722   II: 11980475-11980545
CDS:Y17G7B.2b Y17G7B.2b 1719   II: 11980475-11980545
CDS:Y17G7B.2d Y17G7B.2d 1728   II: 11980475-11980545

1 Laboratories

Primary Identifier
ABR

3 Phenotype

Identifier Name Description
WBPhenotype:0000425 antibody staining reduced Any variation that results in a decrease in the characteristic expression of a gene product, as detected by antibody staining, compared to control animals.
WBPhenotype:0000061 extended life span The duration of viability in the adult phase of the life-cycle surpasses that of control animals.
WBPhenotype:0002078 histone methylation variant The pattern or state of methyl modifications of histone varies from that of controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040327

1 Strain

WormBase ID
WBStrain00000001