WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098306 Genotype  mrg-1(qa6200)
Phenotype Remark  ego-1 RNAi resulted in reduced antibody staining of H3K9me2 histone methylation marks in late pachytene germ cell nuclei Remark  (Figure 9C) ego-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001214 ego-1 F26A3.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26A3.3 F26A3.3 4899   I: 7650667-7650833

1 Laboratories

Primary Identifier
FU

2 Phenotype

Identifier Name Description
WBPhenotype:0000425 antibody staining reduced Any variation that results in a decrease in the characteristic expression of a gene product, as detected by antibody staining, compared to control animals.
WBPhenotype:0002078 histone methylation variant The pattern or state of methyl modifications of histone varies from that of controls.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0001348 chromosome morphology variant Variations in the form or composition of a structure in the cell nucleus which contains the genetic material encoded as DNA and surrounded by histone proteins and other regulatory elements compared to control. In C. elegans the normal cell contains 5 pairs of 'autosomes' and one or two X chromosomes (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040569

0 Strain