WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106569 Phenotype Remark  skn-1(RNAi) resulted in the EMS cell effectively transforming into a 2C like fate, resulted in the ABalp cell effectively transforming into an ABarp like fate, resulted in the ABara cell effectively transforming into an ABala like fate, and resulted in the ABpra cell effectively transforming into an ABpla like fate
Remark  (Table S3, Figure 4) skn-1 RNAi. Authors state RNAi clones obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004804 skn-1 T19E7.2 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19E7.2d T19E7.2d 672   IV: 5651764-5651840
CDS:T19E7.2c T19E7.2c 1602   IV: 5651764-5651840
CDS:T19E7.2a T19E7.2a 1872   IV: 5651764-5651840
CDS:T19E7.2b T19E7.2b 933   IV: 5651764-5651840

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044751

0 Strain