WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106571 Phenotype Remark  pie-1(RNAi) resulted in the ABp cell effectively transforming into a ABa like fate and resulted in the P2 (embryonic founder) cell effectively transforming into a an EMS like fate
Remark  (Table S3, Figure 4) pie-1 RNAi. Authors state RNAi clones obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004027 pie-1 Y49E10.14 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.14b Y49E10.14b 375   III: 12428713-12429087
CDS:Y49E10.14a Y49E10.14a 1008   III: 12426893-12427177

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00044751

0 Strain