WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084826 Phenotype Remark  Ruptured vulva phenotype observed in the majority (greater than 95%) of treated hermaphrodites.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (W09C2.1a).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09C2.1d W09C2.1d 1464   IV: 9615161-9615367
CDS:W09C2.1c W09C2.1c 1464   IV: 9615161-9615367
CDS:W09C2.1a W09C2.1a 1467   IV: 9615161-9615367
CDS:W09C2.1b W09C2.1b 1251   IV: 9616006-9616156
CDS:W09C2.1e W09C2.1e 321   IV: 9619338-9619658
CDS:W09C2.1f W09C2.1f 1248   IV: 9616006-9616156

1 Laboratories

Primary Identifier
RV

6 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000357 unfertilized oocytes laid Animals lay inactivated oocytes. In C elegans this may be due to perturbations that eliminate spermatogenesis or result in the production of defective sperm.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.
WBPhenotype:0000509 sperm pseudopod variant Variation in the morphological appearance or composition of the pseudopod, a cellular projection that facilitates motility of the spermatozoa.
WBPhenotype:0000387 sperm nonmotile The mature male gametes lack self-propelled movement.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00034714

0 Strain