WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110638 Phenotype Remark  RNAi increased the leaving rate per minute. RNAi increased the leaving rate in N2 but not CB4856 (Hawaii) strain.
Remark  In this paper they did RNAi in both N2 (Bristol) and the natural isolate CB4856 (Hawaii or HW), and as expected based on SNP differences, authors saw different results in each background.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012781 nspd-7 Y43C5A.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43C5A.1 Y43C5A.1 213   IV: 10268975-10269187

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001983 lawn leaving behavior variant Variation of the time an individual spent on a patch of food (bacterial lawn) before leaving, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048834

1 Strain

WormBase ID
WBStrain00000001